runGWASAnalysis — runGWASAnalysis • FinnGenUtilsR

runGWASAnalysis

Usage

runGWASAnalysis(
  connection_sandboxAPI,
  cases_finngenids,
  controls_finngenids,
  phenotype_name,
  title = phenotype_name,
  description = phenotype_name,
  notification_email = connection_sandboxAPI$notification_email,
  analysis_type = "additive",
  release = "Regenie12"
)

Arguments

connection_sandboxAPI: PARAM_DESCRIPTION
cases_finngenids: PARAM_DESCRIPTION
controls_finngenids: PARAM_DESCRIPTION
phenotype_name: PARAM_DESCRIPTION
title: PARAM_DESCRIPTION, Default: phenotype_name
description: PARAM_DESCRIPTION, Default: phenotype_name
notification_email: PARAM_DESCRIPTION, Default: connection_sandboxAPI$notification_email
analysis_type: Specifies type of the analysis to perform (additive, recessive, dominant), Default: 'additive'
release: PARAM_DESCRIPTION, Default: 'Regenie12'